7 Commits

Author SHA1 Message Date
Daniel Chelling
83315b6179
perf: optimize large EPUB indexing from O(n^2) to O(n) (#458)
## Summary

Optimizes EPUB metadata indexing for large books (2000+ chapters) from
~30 minutes to ~50 seconds by replacing O(n²) algorithms with O(n log n)
hash-indexed lookups.

Fixes #134

## Problem

Three phases had O(n²) complexity due to nested loops:

| Phase | Operation | Before (2768 chapters) |
|-------|-----------|------------------------|
| OPF Pass | For each spine ref, scan all manifest items | ~25 min |
| TOC Pass | For each TOC entry, scan all spine items | ~5 min |
| buildBookBin | For each spine item, scan ZIP central directory | ~8.4
min |

Total: **~30+ minutes** for first-time indexing of large EPUBs.

## Solution

Replace linear scans with sorted hash indexes + binary search:

- **OPF Pass**: Build `{hash(id), len, offset}` index from manifest,
binary search for each spine ref
- **TOC Pass**: Build `{hash(href), len, spineIndex}` index from spine,
binary search for each TOC entry
- **buildBookBin**: New `ZipFile::fillUncompressedSizes()` API - single
ZIP central directory scan with batch hash matching

All indexes use FNV-1a hashing with length as secondary key to minimize
collisions. Indexes are freed immediately after each phase.

## Results

**Shadow Slave EPUB (2768 chapters):**

| Phase | Before | After | Speedup |
|-------|--------|-------|---------|
| OPF pass | ~25 min | 10.8 sec | ~140x |
| TOC pass | ~5 min | 4.7 sec | ~60x |
| buildBookBin | 506 sec | 34.6 sec | ~15x |
| **Total** | **~30+ min** | **~50 sec** | **~36x** |

**Normal EPUB (87 chapters):** 1.7 sec - no regression.

## Memory

Peak temporary memory during indexing:
- OPF index: ~33KB (2770 items × 12 bytes)
- TOC index: ~33KB (2768 items × 12 bytes)
- ZIP batch: ~44KB (targets + sizes arrays)

All indexes cleared immediately after each phase. No OOM risk on
ESP32-C3.

## Note on Threshold

All optimizations are gated by `LARGE_SPINE_THRESHOLD = 400` to preserve
existing behavior for small books. However, the algorithms work
correctly for any book size and are faster even for small books:

| Book Size | Old O(n²) | New O(n log n) | Improvement |
|-----------|-----------|----------------|-------------|
| 10 ch | 100 ops | 50 ops | 2x |
| 100 ch | 10K ops | 800 ops | 12x |
| 400 ch | 160K ops | 4K ops | 40x |

If preferred, the threshold could be removed to use the optimized path
universally.

## Testing

- [x] Shadow Slave (2768 chapters): 50s first-time indexing, loads and
navigates correctly
- [x] Normal book (87 chapters): 1.7s indexing, no regression
- [x] Build passes
- [x] clang-format passes

## Files Changed

- `lib/Epub/Epub/parsers/ContentOpfParser.h/.cpp` - OPF manifest index
- `lib/Epub/Epub/BookMetadataCache.h/.cpp` - TOC index + batch size
lookup
- `lib/ZipFile/ZipFile.h/.cpp` - New `fillUncompressedSizes()` API
- `lib/Epub/Epub.cpp` - Timing logs

<details>
<summary><b>Algorithm Details</b> (click to expand)</summary>

### Phase 1: OPF Pass - Manifest to Spine Lookup

**Problem**: Each `<itemref idref="ch001">` in spine must find matching
`<item id="ch001" href="...">` in manifest.

```
OLD: For each of 2768 spine refs, scan all 2770 manifest items
     = 7.6M string comparisons

NEW: While parsing manifest, build index:
     { hash("ch001"), len=5, file_offset=120 }
     
     Sort index, then binary search for each spine ref:
     2768 × log₂(2770) ≈ 2768 × 11 = 30K comparisons
```

### Phase 2: TOC Pass - TOC Entry to Spine Index Lookup

**Problem**: Each TOC entry with `href="chapter0001.xhtml"` must find
its spine index.

```
OLD: For each of 2768 TOC entries, scan all 2768 spine entries
     = 7.6M string comparisons

NEW: At beginTocPass(), read spine once and build index:
     { hash("OEBPS/chapter0001.xhtml"), len=25, spineIndex=0 }
     
     Sort index, binary search for each TOC entry:
     2768 × log₂(2768) ≈ 30K comparisons
     
     Clear index at endTocPass() to free memory.
```

### Phase 3: buildBookBin - ZIP Size Lookup

**Problem**: Need uncompressed file size for each spine item (for
reading progress). Sizes are in ZIP central directory.

```
OLD: For each of 2768 spine items, scan ZIP central directory (2773 entries)
     = 7.6M filename reads + string comparisons
     Time: 506 seconds

NEW: 
  Step 1: Build targets from spine
          { hash("OEBPS/chapter0001.xhtml"), len=25, index=0 }
          Sort by (hash, len)
  
  Step 2: Single pass through ZIP central directory
          For each entry:
            - Compute hash ON THE FLY (no string allocation)
            - Binary search targets
            - If match: sizes[target.index] = uncompressedSize
  
  Step 3: Use sizes array directly (O(1) per spine item)
  
  Total: 2773 entries × log₂(2768) ≈ 33K comparisons
  Time: 35 seconds
```

### Why Hash + Length?

Using 64-bit FNV-1a hash + string length as a composite key:
- Collision probability: ~1 in 2⁶⁴ × typical_path_lengths
- No string storage needed in index (just 12-16 bytes per entry)
- Integer comparisons are faster than string comparisons
- Verification on match handles the rare collision case

</details>

---

_AI-assisted development. All changes tested on hardware._
2026-01-28 01:29:15 +11:00
Dave Allie
fb5fc32c5d
Add exFAT support (#150)
## Summary

* Swap to updated SDCardManager which uses SdFat
* Add exFAT support
  * Swap to using FsFile everywhere
* Use newly exposed `SdMan` macro to get to static instance of
SDCardManager
* Move a bunch of FsHelpers up to SDCardManager
2025-12-30 16:09:30 +11:00
Dave Allie
071ccb9d1b
Custom zip parsing (#140)
## Summary

* Use custom zip central directory parsing to lower memory usage when
loading zipped epub content
2025-12-29 21:17:29 +11:00
Jonas Diemer
926c786705
Keep ZipFile open to speed up getting file stats. (#76)
Still a bit raw, but gets the time required to determine the size of
each chapter (for reading progress) down from ~25ms to 0-1ms.

This is done by keeping the zipArchive open (so simple ;)).

Probably we don't need to cache the spine sizes anymore then...

---------

Co-authored-by: Dave Allie <dave@daveallie.com>
2025-12-21 14:38:51 +11:00
Dave Allie
c7a32fe41f
Remove tinyxml2 dependency replace with expat parsers (#9) 2025-12-13 19:36:01 +11:00
Dave Allie
de453fed1d
Stream inflated EPUB HTMLs down to disk instead of inflating in memory (#4)
* Downgrade miniz for stability

* Stream HTML from ZIP down to disk instead of loading all in mem
2025-12-08 00:39:17 +11:00
Dave Allie
2ccdbeecc8
Public release 2025-12-03 22:06:45 +11:00